Unit 2 · Practice for the Topic 2.3 end-of-topic test
You’ve gone through everything in this topic. The summary video below recaps it all, so you’re ready for the questions.
Watch first: the plasma membrane, summed up
From the red blood cell to the film around it: two watery fluids, a bilayer arranged by water, proteins, cholesterol and carbohydrate chains, all drifting.
The drawing shows a white blood cell drifting in lymph, the watery fluid that fills the spaces between the cells of the body. A student labels the fluid inside its plasma membrane X and the fluid outside it Y.
What does the plasma membrane have against each of its two faces, and why?
The drawing shows how a plasma membrane cut across appears under an electron microscope: two dark lines with a pale band between them. The dark lines are where the phospholipid heads lie, one line against the cytosol and one against the extracellular fluid.
What fills the pale band in the middle?
A cell lining the gut has the gut fluid, a watery solution, against one face of its plasma membrane and the cytosol against the other. Its membrane is two layers of phospholipids.
Which parts of the phospholipids touch the gut fluid, and which touch the cytosol?
A membrane protein in a kidney cell has a water-filled passage through it, reaching from the extracellular fluid to the cytosol. Some of the protein’s R groups line the passage. Others lie on the protein’s outer surface, against the phospholipid tails.
Which R groups line the passage, and which face the tails?
A protein found in a plasma membrane has, at one end, a short stretch of six nonpolar R groups, a stretch far shorter than the thickness of the membrane's interior. Every other R group in the protein is polar or charged.
Where does this protein sit?
Glycoproteins and glycolipids are membrane proteins and membrane lipids with a carbohydrate chain attached.
Where in a plasma membrane are their carbohydrate chains?
The model shows a section of a gut cell’s plasma membrane, with the extracellular fluid above and the cytosol below. One part is lettered Y.
What is Y, and why does it sit where it does?
The membrane proteins of a frog cell are tagged so that they glow. A laser is flashed on one small patch of the membrane; the tagged proteins in that patch stop glowing for good. Over the next few minutes the dark patch brightens again, while the total glow from the whole cell stays the same as it was just after the flash.
Why does the dark patch brighten again?
The lipids of a fish cell's plasma membrane are analyzed. One in five of the lipid molecules is a compact molecule of four carbon rings with no charged groups.
What is this molecule, and where in the membrane does it sit?
(a) Identify parts P and S, and state whether a molecule like S could also be found in the lower layer with its sugar chain in the cytosol. (1 point)
A full-credit answer: P is a phospholipid, one of the molecules that make up the two layers.
S is a glycolipid: a phospholipid with a carbohydrate chain attached to its head.
A molecule like S would not be found with its chain in the cytosol.
The carbohydrate chains of glycolipids and glycoproteins face the outside of the cell only.
Here the outside of the cell is the gut fluid, this cell’s extracellular fluid, so every chain faces the gut fluid.
Check the box for each point your answer earns
Accept: "a lipid with a carbohydrate chain" for S. Do not award the point if S is called a glycoprotein or if sugar chains are allowed on the cytosol side.
Common slip: Calling S a glycoprotein, or allowing sugar chains on both faces. S is a two-tailed lipid with a sugar chain, so it is a glycolipid, and such chains face the outside of the cell only.
(b) Describe where water puts the two parts of P: its head and its two tails. (1 point)
A full-credit answer: The gut fluid and the cytosol both contain water.
The head of P is polar, so water attracts it.
So the head faces the watery solution beside it: the gut fluid for the top layer, the cytosol for the bottom layer.
The two tails of P are hydrocarbon chains with no charges or partial charges, so water is not attracted to them.
So the tails point away from the water and lie against the other layer’s tails in the middle.
Check the box for each point your answer earns
Accept: "hydrophilic head toward the water, hydrophobic tails inside" provided the answer says what water does to each part.
Common slip: Saying the tails are 'attracted to each other'. The tails end up together because water pushes them out of the water. Water's pull on the heads holds each phospholipid at the face of the membrane.
(c) Part Q spans both layers. Its middle stretch has only nonpolar R groups, and its two ends have charged R groups. Explain why Q sits with its middle stretch inside the membrane and its two ends in the water. (1 point)
A full-credit answer: Q is a protein: one folded chain of amino acids that spans both layers.
The middle stretch of Q has only nonpolar R groups; water is not attracted to them, so that stretch is pushed out of the water.
So the middle stretch lies among the hydrocarbon tails, in the hydrophobic interior.
The two ends of Q have charged R groups; water is attracted to them.
So one end stays in the gut fluid and the other in the cytosol.
Check the box for each point your answer earns
Accept: "the nonpolar middle is hydrophobic and the charged ends are hydrophilic" with where each ends up stated.
Common slip: Saying a membrane protein must be hydrophobic all over. Most membrane proteins have a nonpolar region and a charged or polar region. Water holds the charged ends of Q, and that is what keeps Q spanning the membrane instead of sinking into it.
(d) Predict where Q is one hour later in the living membrane, and state one thing about Q that has stayed the same. (1 point)
A full-credit answer: An hour later Q is somewhere else along the membrane.
Every piece of a membrane drifts sideways within its layer, because the membrane is fluid.
What has stayed the same is how Q sits.
It still spans the membrane, with its nonpolar middle among the tails and its charged ends in the water, the same end in the cytosol as before.
Check the box for each point your answer earns
Accept: any statement that Q has moved along the membrane and any one preserved feature (still spans the membrane; still the same end in the cytosol; still has its middle among the tails).
Common slip: Predicting that Q stays put, or that it flips over. It drifts sideways, and it keeps its orientation, because water attracts its charged ends in place as it moves.
(e) Explain how the arrangement shown in the model, with heads to the water on both faces and the tails touching in the middle, lets the membrane keep the gut fluid and the cytosol as two separate solutions. (1 point)
A full-credit answer: The phospholipids form a continuous two-layer sheet.
From one face to the other, its interior is hydrocarbon tails with no charges or partial charges.
The polar and charged substances dissolved in the gut fluid and the cytosol are attracted by water.
Nothing in the hydrocarbon interior attracts them, so they stay on their own side of the sheet.
So the two solutions stay separate.
Check the box for each point your answer earns
Accept: "the oily middle keeps the two watery solutions apart" provided the answer says what the middle is made of and why dissolved substances stay on their own side.
Common slip: Saying only 'the membrane is a barrier'. The point is earned by naming what the barrier is made of, the hydrocarbon interior, and why dissolved substances stay on their side of it.
(a) Describe the two parts of a phospholipid and what water does to each. (1 point)
A full-credit answer: A phospholipid has a polar head, which water is attracted to and keeps in the water, and two hydrocarbon tails, which carry no charges or partial charges, so water is not attracted to them and pushes them out of the water.
Check the box for each point your answer earns
Accept: hydrophilic head and hydrophobic tails, provided the answer says what water does to each.
Common slip: Naming the parts as hydrophilic and hydrophobic with no account of what water does. The point needs the pull on the head and the push on the tails.
(b) Explain why the phospholipids on the surface form a film one molecule thick with the tails in the air, while the phospholipids shaken into the water form a skin two molecules thick. (1 point)
A full-credit answer: On the surface of the dish, water is below each phospholipid and air is above it.
The head is polar, so water attracts it into the water.
The tails are hydrocarbon, so water is not attracted to them, and they point up into the air.
One layer satisfies both parts: one molecule thick.
Shaken into the water, the phospholipids have water on every side.
The only place the tails can hide from water is against other tails, so two layers form tail to tail: two molecules thick.
Check the box for each point your answer earns
Accept: "in water the tails can only hide from water by touching the tails of a second layer".
Common slip: Saying the phospholipids 'prefer' two layers. The two-layer skin forms because, with water on both sides, the tails can hide from water only by touching the tails of a second layer.
(c) Make a claim about where the protein ends up when the bubbles form. (1 point)
A full-credit answer: The protein ends up in the skin of the bubbles, spanning it.
Its nonpolar middle lies among the hydrocarbon tails in the interior.
Its two charged ends sit in the water, one inside the bubble and one outside.
Check the box for each point your answer earns
Accept: "it sits in the bilayer with its middle in the interior and its ends in the water". Do not award the point for the protein staying dissolved in the water or lying on the surface of the skin.
Common slip: Leaving the protein dissolved in the water. Its nonpolar middle is pushed out of the water into the tails, and its charged ends keep it spanning the skin.
(d) Support your claim, using what holds each region of the protein where it sits. (1 point)
A full-credit answer: The middle stretch of the protein has only nonpolar R groups.
Water is not attracted to them.
So the water molecules stay attracted to one another and exclude that stretch, which settles among the hydrocarbon tails of the skin.
The two ends have charged R groups.
Water is attracted to charged R groups, so each end stays in the water on its side of the skin.
Therefore the protein is held at both ends with its middle in the tails, so it spans the skin.
Check the box for each point your answer earns
Accept: the same reasoning in terms of hydrophobic and hydrophilic regions, provided both regions are placed and the reason for each placement is given. Do not award the point for evidence about the R groups with no link to where water puts them.
Common slip: Justifying with 'the protein is hydrophobic'. Only its middle is; the charged ends held by water are what keep it spanning the skin rather than sinking into it.