Unit 2 · Practice for the Topic 2.3 end-of-topic test
A white blood cell drifts in lymph, the watery fluid that fills the spaces between the cells of the body. A student draws the cell and labels the fluid inside its plasma membrane and the fluid outside it.
Which labels are correct, and what does the plasma membrane have against each of its two faces?
Under an electron microscope, a plasma membrane cut across appears as two dark lines with a pale band between them. The dark lines are where the phospholipid heads lie, one line against the cytosol and one against the extracellular fluid.
What fills the pale band in the middle?
A cell lining the gut has the gut fluid, a watery solution, against one face of its plasma membrane and the cytosol against the other. Its membrane is two layers of phospholipids.
Which parts of the phospholipids touch the gut fluid, and which touch the cytosol?
A membrane protein in a kidney cell forms a water-filled tunnel through the plasma membrane. Researchers compare the R groups of the amino acids that line the tunnel with those on the protein's outer surface, the surface that faces the phospholipid tails.
Which R groups should be found in each place?
A protein found in a plasma membrane has, at one end, a short stretch of six nonpolar R groups, a stretch far shorter than the thickness of the membrane's interior. Every other R group in the protein is polar or charged.
Where does this protein sit?
Living liver cells are treated with a chemical that clips carbohydrate chains off proteins and lipids. The chemical stays in the extracellular fluid and does not enter the cells. Afterward, every carbohydrate chain that had been attached to the plasma membrane is gone.
What does this result show about where the chains were?
The lipids of a fish cell's plasma membrane are analyzed. One in five of the lipid molecules is a compact molecule of four carbon rings with no charged groups.
What is this molecule, and where in the membrane does it sit?
The membrane proteins of a frog cell are tagged so that they glow. A laser is flashed on one small patch of the membrane; the tagged proteins in that patch stop glowing for good. Over the next few minutes the dark patch brightens again, while the total glow from the whole cell stays the same as it was just after the flash.
Why does the dark patch brighten again?
The model shows a section of a gut cell's plasma membrane with the extracellular fluid above and the cytosol below. Four parts are lettered.
Which lettered part is a whole molecule that sits among the tails, with no part of it in the water, and why does it sit there?
(a) Identify parts P and S, and state whether a molecule like S could also be found in the lower layer with its sugar chain in the cytosol. (1 point)
A full-credit answer: P is a phospholipid, one of the molecules that make up the two layers. S is a glycolipid, a phospholipid with a carbohydrate chain attached to its head. A molecule like S would not be found with its chain in the cytosol: the carbohydrate chains of glycolipids and glycoproteins face the outside of the cell only, here the gut fluid, which is this cell's extracellular fluid.
Check the box for each point your answer earns
Accept: "a lipid with a carbohydrate chain" for S. Do not award the point if S is called a glycoprotein or if sugar chains are allowed on the cytosol side.
Common slip: Calling S a glycoprotein, or allowing sugar chains on both faces. S is a two-tailed lipid with a sugar chain, so it is a glycolipid, and such chains face the outside of the cell only.
(b) Describe where water puts the two parts of P: its head and its two tails. (1 point)
A full-credit answer: The head of P is polar, so water holds it, and it faces the watery solution beside it, the gut fluid for the top layer and the cytosol for the bottom layer. The two tails are hydrocarbon chains with no charges or partial charges, so water has nothing to hold them; they are pushed out of the water and meet the tails of the other layer in the middle, forming the hydrophobic interior.
Check the box for each point your answer earns
Accept: "hydrophilic head toward the water, hydrophobic tails inside" provided the answer says what water does to each part.
Common slip: Saying the tails are 'attracted to each other'. The tails end up together because water pushes them out of the water; what holds the arrangement is water's pull on the heads.
(c) Explain why Q sits with its middle stretch inside the membrane and its two ends in the water. (1 point)
A full-credit answer: The middle stretch of Q has only nonpolar R groups. Water has nothing to hold on them, so that stretch is pushed out of the water and lies among the hydrocarbon tails, in the hydrophobic interior. The two ends have charged R groups, which water holds on to, so one end stays in the gut fluid and the other in the cytosol. One protein has both kinds of region, and each sits where water puts it.
Check the box for each point your answer earns
Accept: "the nonpolar middle is hydrophobic and the charged ends are hydrophilic" with where each ends up stated.
Common slip: Saying a membrane protein must be hydrophobic all over. Most have both kinds of region; the charged ends are what keep Q spanning the membrane instead of sinking into it.
(d) Predict where Q is one hour later in the living membrane, and state one thing about Q that has stayed the same. (1 point)
A full-credit answer: An hour later Q is somewhere else along the membrane: every piece of a membrane drifts sideways within its layer, which is why the model is called fluid. What has stayed the same is how Q sits: it still spans the membrane with its nonpolar middle among the tails and its charged ends in the water, the same end in the cytosol as before.
Check the box for each point your answer earns
Accept: any statement that Q has moved along the membrane and any one preserved feature (still spans the membrane; still the same end in the cytosol; still has its middle among the tails).
Common slip: Predicting that Q stays put, or that it flips over. It drifts sideways, and it keeps its orientation, because water holds its charged ends in place as it moves.
(e) Explain how the arrangement shown in the model lets the membrane keep the gut fluid and the cytosol as two separate solutions. (1 point)
A full-credit answer: The phospholipids form a continuous two-layer sheet whose interior, from one face to the other, is hydrocarbon tails with no charges or partial charges. Water and the polar and charged substances dissolved in the gut fluid and the cytosol are held by water and have nothing to hold them in that interior, so they stay on their own side. Cholesterol steadies the sheet, and the proteins and sugar chains sit in it and on it without breaking it, so the two solutions stay separate.
Check the box for each point your answer earns
Accept: "the oily middle keeps the two watery solutions apart" provided the answer says what the middle is made of and why dissolved substances stay on their own side.
Common slip: Saying only 'the membrane is a barrier'. The point is earned by naming what the barrier is made of, the hydrocarbon interior, and why dissolved substances stay on their side of it.
(a) Describe the two parts of a phospholipid and what water does to each. (1 point)
A full-credit answer: A phospholipid has a polar head, which water holds on to and keeps in the water, and two hydrocarbon tails, which carry no charges or partial charges, so water has nothing to hold them and pushes them out of the water.
Check the box for each point your answer earns
Accept: hydrophilic head and hydrophobic tails, provided the answer says what water does to each.
Common slip: Naming the parts as hydrophilic and hydrophobic with no account of what water does. The point needs the pull on the head and the push on the tails.
(b) Explain why the phospholipids on the surface form a film one molecule thick with the tails in the air, while the phospholipids shaken into the water form a skin two molecules thick. (1 point)
A full-credit answer: On the surface of the dish, each phospholipid can satisfy both of its parts with one layer: the head sits in the water and the tails point up into the air, away from the water. Shaken into the water, the phospholipids are surrounded by water on every side, so the tails have nowhere to escape to except against other tails. Two layers form tail to tail, hiding the tails in the middle, with heads facing the water inside the bubble and outside it: a skin two molecules thick.
Check the box for each point your answer earns
Accept: "in water the tails can only hide from water by meeting the tails of a second layer".
Common slip: Saying the phospholipids 'prefer' two layers. The two-layer skin forms because, with water on both sides, the tails can hide from water only by meeting the tails of a second layer.
(c) Predict where the added protein ends up. (1 point)
A full-credit answer: The protein ends up in the skin of the bubbles, spanning it: its nonpolar middle lies among the hydrocarbon tails in the interior, and its two charged ends sit in the water, one inside the bubble and one outside.
Check the box for each point your answer earns
Accept: "it sits in the bilayer with its middle in the interior and its ends in the water". Do not award the point for the protein staying dissolved in the water or lying on the surface of the skin.
Common slip: Leaving the protein dissolved in the water. Its nonpolar middle is pushed out of the water into the tails, and its charged ends keep it spanning the skin.
(d) Justify your prediction using what holds each region of the protein where it sits. (1 point)
A full-credit answer: The middle stretch has only nonpolar R groups. Water has nothing to hold on them, so it pushes that stretch out of the water, and the only place free of water is the hydrocarbon interior of the skin. The two ends have charged R groups, which water holds on to, so each end stays in the water on its side. Held at both ends and pushed in the middle, the protein spans the skin, with the same rule placing every part of it that places the phospholipids themselves.
Check the box for each point your answer earns
Accept: the same reasoning in terms of hydrophobic and hydrophilic regions, provided both regions are placed and the reason for each placement is given.
Common slip: Justifying with 'the protein is hydrophobic'. Only its middle is; the charged ends held by water are what keep it spanning the skin rather than sinking into it.