Unit 2 · Practice for the Topic 2.10 end-of-topic test
In the roots of a pea plant, some cells house nitrogen-fixing bacteria. Each bacterium lives inside a root cell, wrapped in a membrane the plant makes, and supplies the plant with nitrogen compounds while the plant supplies it with sugar.
Which term names this kind of relationship?
Biologists make a claim about where chloroplasts came from.
What is the claim?
The mitochondria of a bread mold each hold their own DNA: one closed loop, separate from the DNA in the mold's nucleus, which is in long molecules with two free ends.
Which feature of a bacterium does this match, and what does the match suggest?
An antibiotic that stops bacterial ribosomes is added to a culture of single-celled green algae. Protein-making by the ribosomes in the algae's cytosol continues at 97% of its normal rate; protein-making by the ribosomes inside their chloroplasts falls to 4%. In a culture of free-living cyanobacteria it falls to 3%.
What do the three results show?
A student writes: 'A mitochondrion's two membranes prove that a cell was engulfed, and the inner membrane is the engulfed bacterium's own membrane.'
Which statement corrects the student?
In a growing leaf cell, the number of chloroplasts is counted at 12 one morning and 24 the next morning, although the cell itself has not divided. Each new chloroplast appeared when an existing one pinched in the middle and split. Each chloroplast is about 5 μm long, the size of a large bacterium.
What do these observations add to the case for endosymbiosis?
A student studies the mitochondria of a newly found protist and lists four observations.
Which observation supports the claim that these mitochondria descend from a bacterium?
A soil bacterium and a single-celled alga, a eukaryote, both keep their DNA in one region of the cell and both run particular reactions in particular places.
Which statement compares their interiors correctly?
A protist holds an organelle that makes ATP without using oxygen. Researchers compare a 40-position stretch of its DNA with the same stretch from three sources. Matching positions out of 40: with a bacterium of kind X, 37; with the protist's own nucleus, 9; with a bacterium of kind Y, 14.
Which conclusion does the comparison support?
(a) Describe the claim the student could make about the origin of the compartment. (1 point)
A full-credit answer: The compartment descends from a once free-living bacterium, which was taken inside an ancestor of the alga and then survived there and reproduced with it, generation after generation: endosymbiosis.
Check the box for each point your answer earns
The host cell and the descent over generations must both be present. Do not award 'it is a bacterium living in the alga' with no ancestor and no generations.
Common slip: Leaving out the host cell or the passing of generations. Both are part of the claim.
(b) Identify two features of the compartment that fit the claim, and state what each shows. (1 point)
A full-credit answer: First, the compartment holds its own DNA as one closed loop, which is the form a bacterium's DNA takes. Second, its ribosomes are stopped by an antibiotic that stops bacterial ribosomes while the cytosol's keep working, which shows they are built like a bacterium's rather than supplied by the host.
Check the box for each point your answer earns
Both features need a reason. Do not accept 'a membrane around it' alone, because every organelle has one.
Common slip: Listing two features with no reasons, or giving 'a membrane around it'. Every organelle has a membrane; the two membranes are the feature that fits engulfment.
(c) Explain how the DNA comparison supports the claim. (1 point)
A full-credit answer: DNA that is closer in sequence points to a closer relative. The compartment's DNA matches the free-living nitrogen-fixing bacterium at 46 of 50 positions but the alga's own nucleus at only 11 of 50, so the compartment came from a bacterium-like cell rather than from the host's own DNA.
Check the box for each point your answer earns
Accept the comparison in words with the inference drawn. Do not award the point for the numbers alone, or for reading the 11 of 50 as evidence that the nucleus made the compartment.
Common slip: Quoting the numbers without drawing the inference. Say what the closer match points to.
(d) Identify the observation in the list that says nothing about where the compartment came from, and explain your choice. (1 point)
A full-credit answer: The observation that the alga lives mostly in nitrogen-poor lakes says nothing about where the compartment came from, because it tells you what the compartment does for the alga, and where the alga lives, rather than what the compartment is like.
Check the box for each point your answer earns
Do not award the point for any of the five features (DNA, ribosomes, membranes, division, size) named as irrelevant.
Common slip: Picking the size or the two membranes as irrelevant. Both are features a bacterial ancestor would leave behind; where the alga lives is the odd one out.
(e) The student says: 'Because the compartment descends from a free-living bacterium, it should grow on its own if we take it out of the alga.' Predict what happens when the compartments are placed alone in lake water, and justify your prediction. (1 point)
A full-credit answer: Placed alone in lake water, the compartments do not grow and divide as free-living cells; they may work for a short time, then stop. The claim is about the ancestor, which was free-living; over the generations inside the host its descendants became organelles that depend on the alga and cannot live on their own. Being unable to live alone is what the account expects, not evidence against it.
Check the box for each point your answer earns
Accept: 'it is an organelle now, not a bacterium'. Do not award a prediction that the compartments live and multiply like free-living bacteria.
Common slip: Arguing that a free-living ancestor makes the compartment free-living now. The descendant is an organelle; dependence is what the account expects.
(a) Describe how this relationship resembles the one biologists propose for the origin of mitochondria. (1 point)
A full-credit answer: Like the ancestor of mitochondria, these bacteria live inside a larger host cell and are passed on with the host from one generation to the next, supplying the host with something it needs: one organism living inside another, endosymbiosis.
Check the box for each point your answer earns
Accept: 'one organism living inside another and reproducing with it'. Living inside the host and passing down the generations are both needed.
Common slip: Saying only that the bacteria are 'inside the aphid'. The passing down the generations is what matches the mitochondrion's story.
(b) Explain why the bacteria's failure to grow outside an aphid fits the endosymbiosis account rather than counting against it. (1 point)
A full-credit answer: The account says the ancestor was free-living, not the descendant. Over countless generations inside the host, the bacteria have come to depend on the aphid, and their DNA has already shrunk to a seventh of a free-living relative's. Mitochondria show the same dependence, so failing to grow alone is what the account expects of a long-term endosymbiont.
Check the box for each point your answer earns
Accept: 'the ancestor was free-living; the descendant depends on the host'. Do not award the point for 'they are not bacteria any more' with no reference to the change over generations.
Common slip: Treating the failure to grow alone as evidence against a free-living ancestor. Dependence is what long residence inside a host produces.
(c) Predict how a stretch of the bacteria's DNA would compare with the same stretch from a free-living relative and from the aphid's own nucleus. (1 point)
A full-credit answer: The bacteria's DNA would match the free-living relative far more closely than the aphid's own nuclear DNA, which would match at about the level two unrelated stretches share by chance.
Check the box for each point your answer earns
Do not award a prediction that the aphid's nucleus is the closer match.
Common slip: Predicting a close match with the aphid's nucleus because the two have lived together so long. Living together does not make DNA sequences converge; ancestry sets the match.
(d) Biologists say that the aphid arrangement, a host-made membrane pocket around a bacterium that keeps its own membrane, is consistent with a mitochondrion having two membranes, and they stop short of saying it proves how mitochondria arose. Justify the biologists' use of 'consistent with' rather than 'proves'. (1 point)
A full-credit answer: A cell taken inside another would end up with the host's pocket membrane around its own, so two membranes are exactly what the account predicts; that is why a mitochondrion's two membranes are consistent with it. But an observation that fits an account is evidence, not proof: nobody observed the ancient event, and two membranes could have arisen some other way. So biologists say the evidence is consistent with the account and claim nothing more.
Check the box for each point your answer earns
Accept: 'fits means the evidence agrees with the claim; proof would need to rule out every other explanation'. Do not award 'the two membranes prove engulfment', or 'the outer membrane is the host's' stated as fact.
Common slip: Treating 'fits' as 'proves', or stating as fact which of a mitochondrion's membranes came from the host. The aphid case shows how two membranes could arise; it does not settle what happened to mitochondria.